Resolving brain architecture with comprehensive spatial gene expression

Written by 10x Genomics

Spatially resolved gene expression can provide a powerful complement to traditional histopathology methods, enabling a greater understanding of cellular heterogeneity and organization within the central nervous system. This Data Spotlight explores how integrated sequencing and histological data from the Visium Spatial Gene Expression assay enabled unbiased clustering of cell types that reliably correlates with the neuroanatomy of both rodent and human specimens.

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This Data Spotlight highlights:

  • How to characterize discrete neuroanatomical brain regions
  • How to map expression of genes to specific brain regions or structures
  • How to visualize spatial patterns of gene expression together with protein detection by immunofluorescence on the same tissue section

And much more!

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